BIOLOGY 411


Advanced Conservation Biology
Tuesday & Thursday
9:15-10:30 AM
LSA 119

Instructor
Dr. Leah Gerber
Department of Biology
Office: LSA 212; Lab: LSA 209
Leah.gerber@asu.edu

Texts
Caughley, G. and A. Gunn. 1996. Conservation biology in theory and practice. Blackwell Science, Oxford. 459 pp.

Morris, W.F. and D.F. Doak. 2002. Quantitative conservation biology: Theory and practice of population viability analysis. Sinauer Associates, Sunderland. 477 pp.

Gibbs, J.P., M.L. Hunter, E.J. Sterling. 1998. Problem-solving in conservation biology and wildlife management. Blackwell Science, Malden. 215 pp. (optional)

Class Website
https://myasucourses.edu

Office Hours
Tuesdays 4:00-5:30
Thursdays 10:30-12:00

Course Goals
This course is designed for advanced undergraduates and graduate students interested in quantitative conservation biology. We will explore the theory and application of demography and extinction models to the management of threatened and endangered plant and animal populations. The problems faced by small, declining and exploited populations will be emphasized. Classes will be comprised of lectures, discussion and computer laboratories. Demographic analyses will include age- and stage-based projection matrices using both deterministic and stochastic methods. We will learn how to calculate the population growth rate, estimate population parameters, and evaluate the elasticity and sensitivity of demographic parameters to perturbation. Students will use these techniques to develop an in depth research project and term paper. The class will provide students with quantitative, written and oral communication skills that will enhance your career options.

Grading
25%: Midterm
30%: Directed Research Project
10%: Directed Research Project Proposal
10%: Directed Research Project Final Oral Presentation
10%: Mock hearing presentation
15%: Participation

Exams
There will be one midterm in essay format. I will pass out questions several days before the exam. Questions will include material presented in lecture as well as information from your reading assignments. You are free to discuss the questions amongst yourselves and consult relevant literature. You can bring a ½ page college-lined, one-sided outline for each question to the exam (we will check these). Responses to each question will be limited to 2, college-lined, one-sided pages for each question. Grading of essay questions WILL include grammar, structure, and clarity.

Directed Research Project
Directed research projects will focus on conducting a PVA for an endangered species. I will provide datasets and you will work in teams of four to conduct analyses. You should organize and format your paper to be submitted for publication in a peer-reviewed journal. Sections should include an introduction, methods, results, and discussion; check the "instructions to authors" for the journal Conservation Biology at http://conbio.net/scb/Publications/ConsBio/, and note specific format for citations!). The maximum length for the paper is 25 pages, not including references and figures. You will have a chance to get feedback from me when you submit your proposal on September 19. The proposal should make clear who will be doing what for the final paper. I encourage you to take this assignment seriously and consider working on a paper that you will actually submit to for publication.


Lecture Schedule – SUBJECT TO CHANGE

L-1 27 August IntroductionBiodiversity, Extinction rates and threats Chapter 1 (Caughley & Gunn)
L-2 29 August Introduction to population biology*Identify groups for project Chapter 3 (Caughley & Gunn)
L-3 3 September Population growth, demographic stochasticity and small populations Chapter 1 & 2 (Morris & Doak)
L-4 5 September PVA, delisting criteria & Endangered Species Act Recovery Plans Chapter 3 (Morris & Doak)
D-1 10 September Estimating extinction risk with diffusion approximation Chapter 4 (Morris & Doak)
L-5 12 September Population viability analysis (PVA) Computer lab (LSE 236)*Bring your data sets Chapter 6 (Morris & Doak)
L-6 17 September Demography and life history Chapter 7 (Morris & Doak)
D-2 19 September* Discussion: Estimating extinction risk, assumptions, adding complexities, and conservation implications Chapter 12 (Morris & Doak)
L-7 24 September Paul Barrett, USFWS: PVA, Recovery plans and listing decisions in Arizona Chapter 7 (Caughley & Gunn)
L-8 26 September Life tables and age structure computer lab (LSE 236) Chapter 6 (Caughley & Gunn)
L-9 1 October Matrix population models Chapter 6 cont.
L-10 3 October Matrix population models computer lab (LSE 236)*Turn in proposals Chapter 6 cont.
L-11 8 October Disease and conservation Handout #1: Lafferty & Gerber 2002
L-12 10 October Jesse Brunner & Verma Miera, ASU: Epidemiology & amphibian declines in Arizona
D-3 15 October Discussion: Pathogens, PVA and conservation Lafferty & Gerber 2002
L-13 17 October Dan Doak, UCSC: Island Biogeography, metapopulations and source-sink dynamics Chapter 11 (Morris & Doak)
L-14 22 October Reserve Design I Chapter 10 (Caugley & Gunn)
L-15 24 October Reserve Design II*Turn in draft papers (analysis, results, preliminary conclusions) Handout #2
D-4 29 October Class Exercise: Mock hearing on reserve sighting
L-16 31 October* Julie Stromberg, ASU: Restoration and management of exotic saltcedar and endangered flycatcher in Arizona
L-17 5 November Joe Quiroz, The Nature Conservancy: Putting Conservation Science into Practice -- A perspective from The Nature Conservancy. Handout #3
D-5 7 November Discussion: Effective uses of science in policy and lobbying Handout #4
L-18 12 November Conservation Genetics Chapter 8 (Caughley & Gunn)
L-19 14 November Rich Fredrickson, ASU: Mexican wolf genetics and conservation Computer lab (LSE 236) Chapter 9 (Caughley & Gunn)
19 November Tom Dowling, ASU: Success in conservation: molecular evidence from the razorback sucker Chapter 9 cont.
L-20 21 November* MIDTERM
L-21 26 November Richard Cudney, UA: Endangered species and reserve design in the Gulf of California
28 November Thanksgiving
D-6 3 December Student presentations (5 minutes each)
D-7 5 December Student presentations continued
D-8 10 December Overarching themes, Course evaluation, jobs in conservation*Term papers due